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2007 Initiative: Interdisciplinary Research Retreat
Biofilm Mechanics Workshop
A workshop review, by Phil Stewart
June 28-30, 2007 Montana State University Campus
Bozeman, Montana
Participants list, below
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Late June can be a beautiful time in Montana, and so it was this year when
the Center for Biofilm Engineering (CBE) hosted a workshop on the topic of
biofilm mechanics on the Montana State University campus. This event
brought together 26 participants from Montana, Texas, Florida, New York,
Minnesota, Pennsylvania, North Carolina, Canada, Germany, and the
Netherlands to share ideas and recent results about what holds microbial
biofilms together and how these biological assemblages can be understood
as mechanical structures that deform, move, and flow. The meeting was
informal, convivial, and collaborative in spirit. Technical presentations
were interspersed with discussion sessions. The modest size of the group
and relaxed atmosphere helped make the questioning and discussion
particularly unfettered, creative, and leavened with humor. The group
dined together in the cellar of an attractive restaurant in historic
downtown Bozeman, and a free afternoon allowed for some fishing, hiking,
beer sipping, and project planning. We are indebted to Isaac Klapper for
conceiving this event and organizing the program. |
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The interdisciplinary nature of the group was obvious at lunch one day
when our table of five included a physicist, a chemical engineer, two
microbiologists, and an electrical engineer. Also represented among the
workshop participants were mathematicians, civil engineers, mechanical
engineers, a biomedical engineer and a biochemist.
Rather than encapsulate specific talks, let me just summarize here some of
the themes, hypotheses, and ideas that emerged in the course of the
workshop:
Biofilm cohesion is realized through multiple polymers and multiple
cohesive forces;
Specific polysaccharides are distributed heterogeneously in the biofilm
matrix; these can be localized via lectin staining and microscopy;
Abiotic components (precipitates, corrosion products, dead white blood
cells, etc.) are significant in real-world systems and likely contribute
to the material properties of biofilms;
Biofilm should not be a prison; biological pathways for dispersion of
cells from a biofilm are being elucidated;
Biofilm properties are being probed and forces measured by pushing and
pulling on biofilms with ingenious instrumental adaptations of atomic
force microscopes, micropipette cantilevers, magnetic resonance
microscopes, and fluid jets;
These measurements point to microscale heterogeneity in the distribution
of EPS and in local mechanical properties;
Fluid-biofilm interactions give rise to drag, lift, detachment,
channeling, differential effects during antimicrobial treatment and also
to complex motions of the biomass such as oscillation, mixing, and
rolling;
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Beautiful June weather encouraged outdoor activities
during free time. Above, from left, are participants: Ekaterina Paramonova,
Groningen, The Netherlands; Ahmed Touhami and John Dutcher, Guelph,
Ontario, Canada; and Bruce Ayati, Dallas, Texas. |
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Workshop organizers Paul Stoodley, Center for Genomic
Sciences at the Allegheny-Singer Research Institute, Pittsburgh; Phil
Stewart, CBE Director; Isaac Klapper, MSU Professor, Mathematics. |
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Cells compete for space and displace their neighbors as bacteria grow
inside a biofilm;
Modelers are tackling biofilm mechanics by simulating a network of
interconnected, breakable springs or by describing the biofilm as a
compressible fluid subjected to combined attractive and repellant forces.
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One of my visions for the CBE is that this center will serve as a meeting
ground where researchers can come together to brainstorm and network for
mutual benefit. I would like to thank all of the Biofilm Mechanics
Workshop participants for helping to make this an example of just this
spirit of sharing and synthesis. I am inspired by the success of this
event to seek ways to continue regular workshops of this kind.
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Participant List
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Recep Avci
Physics, Montana State University
Bozeman, MT
Bruce Ayati
Mathematics, Southern Methodist University
Dallas, TX
Sarah Codd
Mechanical & Industrial Engineering & CBE, MSU
Bozeman, MT
Nick Cogan
Mathematics, Florida State University
Tallahassee, FL
Al Cunningham
Civil Engineering & CBE, MSU
Bozeman, MT
David G. Davies
Biological Sciences, Binghamton University
Binghamton, NY
Willy Davison
Chemical & Biological Engineering & CBE, MSU
Bozeman, MT
Jack Dockery
Mathematical Science & CBE, MSU
Bozeman, MT
John Dutcher
Physics, University of Guelph
Guelph, ON, Canada
Hans-Curt Flemming
Biofilm Centre, University of Duisburg-Essen
Duisburg, Germany
Michael Franklin
Microbiology & CBE, MSU
Bozeman, MT
Gill Geesey
Microbiology & CBE, MSU
Bozeman, MT
Robin Gerlach
Chemical & Biological Engineering & CBE, MSU
Bozeman, MT
Raymond M. Hozalski
Civil Engineering, University of Minnesota
Minneapolis, MN
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Jennifer Horneman
Chemical & Biological Engineering & CBE, MSU
Bozeman, MT
Isaac Klapper
Mathematical Science & CBE, MSU
Bozeman, MT
Ben Klayman
Civil & Environmental Engineering & CBE, MSU
Bozeman, MT
Bertram Manz
Magnetic Resonance Imaging, Fraunhofer-Institut für Biomedizinische
Technik
St. Ingbert Germany
Thomas R. Neu
Helmholtz Centre for Environmental Research
Magdeburg, Germany
Ekaterina Paramonova
Biomedical Engineering, University Medical Center Groningen and University
of Groningen
Groningen, The Netherlands
Joseph Seymour
Chemical & Biological Engineering & CBE, MSU
Bozeman, MT
Phil Stewart
Chemical & Biological Engineering & CBE, MSU
Bozeman, MT
Paul Stoodley
Center for Genomic Sciences, Allegheny-Singer Research Institute
Pittsburgh PA
Zhiyong Suo
Physics, Montana State University
Bozeman, MT
Michael Sutton
Center for Biofilm Engineering & CBE, MSU
Bozeman, MT
Ahmed Touhami
Physics, University of Guelph
Guelph, ON, Canada
Daniel Wozniak
Microbiology & Immunology, Wake Forest University School of Medicine
Winston-Salem, NC |
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A hike to Lava Lake provided refreshment for Thomas R. Neu, Magdeburg,
Germany; Bertram Manz, St. Ingbert Germany; and Phil Stewart, MSU-CBE. |
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